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Polar amino acids are capable of forming hydrogen bonds, and charged amino acid side chains are able to form ionic bonds. Weak van der Waals interactions are used to connect hydrophobic side chains to one another. The majority of the bonds that these side chains create are non-covalent.
The interactions between hydrophobes and water are referred to as hydrophobic interactions. Nonpolar molecules known as hydrophobes typically have a long chain of carbons and do not interact with water molecules. A good illustration of this particular interaction is when fat and water are combined.
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